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was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

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perform basic research in molecular biology

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offer vital services to scientists in the member states

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scientists, students and visitors at all levels

Transfer

and development of technology

Develop

new instruments and methods

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life science research in Europe

More about EMBL

Six sites

represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

Grenoble

Structural biology

Hamburg

Structural biology

Heidelberg

Main laboratory

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

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sample_name:"Proteasome subunit alpha type-6" AND author_name:"Plitzko JM"

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EMD-4322

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26S proteasome, s4 state

Release date: Aug. 29, 2018
Resolution: 4.5 Å
EM Method: Single-particle
Fitted PDBs: 6fvw
Q-score: 0.204

Eisele MR, Reed RG, Rudack T, Schweitzer A, Beck F, Nagy I, Pfeifer G, Plitzko JM, Baumeister W, Tomko Jr RJ, Sakata E

Cell Rep (2018) 24 pp. 1301-1315.e5 [ Pubmed: 30067984 DOI: doi:10.1016/j.celrep.2018.07.004 ]

Sample:

Proteasome subunit alpha type-1 (27 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn8 (34 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit 7 homolog (47 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit 4 homolog (43 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Ubiquitin carboxyl-terminal hydrolase rpn11 (32 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn1 (106 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-1 (21 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-6 (24 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit 6b homolog (43 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-5 (23 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit alpha type-2 (26 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome (Complex from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn13 (14 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit 8 homolog (45 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Water (18 Da, Ligand)
Proteasome subunit alpha type-6 (25 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit alpha type-5 (26 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit 6a (46 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn6 (49 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-4 (22 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn7 (46 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Probable proteasome subunit alpha type-7 (27 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Adenosine-5'-diphosphate (427 Da, Ligand)
Proteasome subunit alpha type-3 (26 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome complex subunit sem1 (10 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit alpha type-4 (28 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn9 (45 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Adenosine-5'-triphosphate (507 Da, Ligand)
Proteasome subunit beta type-2 (24 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn10 (21 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome subunit rpt4 (43 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn12 (31 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn3 (55 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn5 (51 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-3 (22 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Magnesium ion (24 Da, Ligand)
Proteasome subunit beta type-7 (25 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn2 (101 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))

[Show more]

EMD-4321

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26S proteasome, s3 state

Release date: Aug. 22, 2018
Resolution: 5.4 Å
EM Method: Single-particle
Fitted PDBs: 6fvv
Q-score: 0.149

Eisele MR, Reed RG, Rudack T, Schweitzer A, Beck F, Nagy I, Pfeifer G, Plitzko JM, Baumeister W, Tomko Jr RJ, Sakata E

Cell Rep (2018) 24 pp. 1301-1315.e5 [ Pubmed: 30067984 DOI: doi:10.1016/j.celrep.2018.07.004 ]

Sample:

26s proteasome regulatory subunit rpn8 (34 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit 4 homolog (43 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Probable proteasome subunit alpha type-7 (26 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Ubiquitin carboxyl-terminal hydrolase rpn11 (32 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit alpha type-1 (27 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn1 (106 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-1 (21 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-6 (24 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-5 (23 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit alpha type-2 (27 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome (Complex from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn13 (14 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit alpha type-6 (25 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit 8 homolog (45 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit 6a (46 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn6 (49 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-4 (22 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn7 (46 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Adenosine-5'-diphosphate (427 Da, Ligand)
Proteasome subunit alpha type-4 (28 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit alpha type-3 (27 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome complex subunit sem1 (10 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn9 (45 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Adenosine-5'-triphosphate (507 Da, Ligand)
Proteasome subunit beta type-2 (24 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn10 (21 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome subunit rpt4 (43 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn12 (31 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn3 (55 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit alpha type-5 (26 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn5 (51 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-3 (22 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit 7 homolog (46 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Magnesium ion (24 Da, Ligand)
Proteasome subunit beta type-7 (25 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn2 (101 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit 6b homolog (44 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))

[Show more]

EMD-4323

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26S proteasome, s5 state

Release date: Aug. 22, 2018
Resolution: 4.9 Å
EM Method: Single-particle
Fitted PDBs: 6fvx
Q-score: 0.187

Eisele MR, Reed RG, Rudack T, Schweitzer A, Beck F, Nagy I, Pfeifer G, Plitzko JM, Baumeister W, Tomko Jr RJ, Sakata E

Cell Rep (2018) 24 pp. 1301-1315.e5 [ Pubmed: 30067984 DOI: doi:10.1016/j.celrep.2018.07.004 ]

Sample:

Proteasome subunit alpha type-2 (26 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn8 (34 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit 7 homolog (47 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit 4 homolog (43 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Ubiquitin carboxyl-terminal hydrolase rpn11 (32 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn1 (106 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-1 (21 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-6 (24 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn2 (101 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-5 (23 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome (Complex from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn13 (14 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit 8 homolog (45 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit alpha type-6 (25 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit 6a (46 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn6 (49 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-4 (22 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn7 (46 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Adenosine-5'-diphosphate (427 Da, Ligand)
Proteasome subunit alpha type-3 (26 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Probable proteasome subunit alpha type-7 (26 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome complex subunit sem1 (10 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit alpha type-4 (28 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn9 (45 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Adenosine-5'-triphosphate (507 Da, Ligand)
Proteasome subunit beta type-2 (24 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn10 (21 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome subunit rpt4 (43 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn12 (31 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn3 (55 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit alpha type-5 (26 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn5 (51 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-3 (22 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Magnesium ion (24 Da, Ligand)
Proteasome subunit beta type-7 (25 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit alpha type-1 (27 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit 6b homolog (44 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))

[Show more]

EMD-4324

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26S proteasome, s6 state

Release date: Aug. 22, 2018
Resolution: 6.1 Å
EM Method: Single-particle
Fitted PDBs: 6fvy
Q-score: 0.136

Eisele MR, Reed RG, Rudack T, Schweitzer A, Beck F, Nagy I, Pfeifer G, Plitzko JM, Baumeister W, Tomko Jr RJ, Sakata E

Cell Rep (2018) 24 pp. 1301-1315.e5 [ Pubmed: 30067984 DOI: doi:10.1016/j.celrep.2018.07.004 ]

Sample:

Proteasome subunit alpha type-1 (27 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn8 (34 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit 7 homolog (47 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit 4 homolog (43 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Ubiquitin carboxyl-terminal hydrolase rpn11 (32 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn1 (106 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-1 (21 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-6 (24 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-5 (23 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome (Complex from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn13 (14 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit 8 homolog (45 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit alpha type-6 (25 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit alpha type-5 (26 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit 6a (46 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn6 (49 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-4 (22 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn7 (46 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Probable proteasome subunit alpha type-7 (27 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Adenosine-5'-diphosphate (427 Da, Ligand)
Proteasome subunit alpha type-3 (26 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome complex subunit sem1 (10 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit alpha type-4 (28 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn9 (45 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Adenosine-5'-triphosphate (507 Da, Ligand)
Proteasome subunit beta type-2 (24 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn10 (21 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome subunit rpt4 (43 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn12 (31 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn3 (55 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn5 (51 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-3 (22 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Magnesium ion (24 Da, Ligand)
Proteasome subunit alpha type-2 (26 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-7 (25 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn2 (101 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit 6b homolog (44 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))

[Show more]

EMD-3534

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26S proteasome in presence of ATP (s1)

Release date: March 8, 2017
Resolution: 4.1 Å
EM Method: Single-particle
Fitted PDBs: 5mp9, 5mpd
Q-score: 0.2815

Wehmer M, Rudack T, Beck F, Aufderheide A, Pfeifer G, Plitzko JM, Forster F, Schulten K, Baumeister W, Sakata E

PNAS (2017) 114 pp. 1305-1310 [ Pubmed: 28115689 DOI: doi:10.1073/pnas.1621129114 ]

Sample:

26s protease regulatory subunit 7 homolog (52 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit alpha type-6 (25 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-4 (22 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s protease subunit rpt4 (49 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s protease regulatory subunit 4 homolog (48 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s protease regulatory subunit 6a (48 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s protease regulatory subunit 8 homolog (45 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-1 (23 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-7 (29 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit alpha type-1 (28 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit alpha type-4 (28 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s protease regulatory subunit 6b homolog (47 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Probable proteasome subunit alpha type-7 (31 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-2 (28 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit alpha type-3 (28 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-3 (22 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Adenosine-5'-diphosphate (427 Da, Ligand)
Proteasome subunit alpha type-5 (28 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome of saccharomyces cerevisiae in presence of atp (s1) (1 MDa, Complex from Saccharomyces cerevisiae S288c)
Proteasome subunit beta type-5 (31 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-6 (26 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Adenosine-5'-triphosphate (507 Da, Ligand)
Proteasome subunit alpha type-2 (27 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Magnesium ion (24 Da, Ligand)

[Show more]

EMD-3535

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26S proteasome in presence of ATP (s2)

Release date: March 8, 2017
Resolution: 4.5 Å
EM Method: Single-particle
Fitted PDBs: 5mpa, 5mpe
Q-score: 0.2305

Wehmer M, Rudack T, Beck F, Aufderheide A, Pfeifer G, Plitzko JM, Forster F, Schulten K, Baumeister W, Sakata E

PNAS (2017) 114 pp. 1305-1310 [ Pubmed: 28115689 DOI: doi:10.1073/pnas.1621129114 ]

Sample:

26s protease regulatory subunit 7 homolog (52 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit alpha type-6 (25 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-4 (22 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome of saccharomyces cerevisiae in presence of atp (s2) (1 MDa, Complex from Saccharomyces cerevisiae S288c)
26s protease subunit rpt4 (49 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s protease regulatory subunit 4 homolog (48 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s protease regulatory subunit 6a (48 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s protease regulatory subunit 8 homolog (45 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-1 (23 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-7 (29 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit alpha type-1 (28 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit alpha type-4 (28 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s protease regulatory subunit 6b homolog (47 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Probable proteasome subunit alpha type-7 (31 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-2 (28 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit alpha type-3 (28 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-3 (22 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Adenosine-5'-diphosphate (427 Da, Ligand)
Proteasome subunit alpha type-5 (28 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-5 (31 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-6 (26 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Adenosine-5'-triphosphate (507 Da, Ligand)
Proteasome subunit alpha type-2 (27 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Magnesium ion (24 Da, Ligand)

[Show more]

EMD-3536

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26S proteasome in presence of AMP-PNP (s3)

Release date: March 8, 2017
Resolution: 7.8 Å
EM Method: Single-particle
Fitted PDBs: 5mpb
Q-score: 0.132

Wehmer M, Rudack T, Beck F, Aufderheide A, Pfeifer G, Plitzko JM, Forster F, Schulten K, Baumeister W, Sakata E

PNAS (2017) 114 pp. 1305-1310 [ Pubmed: 28115689 DOI: doi:10.1073/pnas.1621129114 ]

Sample:

26s protease regulatory subunit 7 homolog (52 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn8 (38 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit alpha type-6 (25 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-4 (22 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s protease subunit rpt4 (49 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s protease regulatory subunit 4 homolog (48 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s protease regulatory subunit 6a (48 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s protease regulatory subunit 8 homolog (45 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn12 (31 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-1 (23 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-7 (29 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit alpha type-1 (28 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit alpha type-4 (28 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s protease regulatory subunit 6b homolog (47 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Probable proteasome subunit alpha type-7 (31 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn7 (49 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Phosphoaminophosphonic acid-adenylate ester (506 Da, Ligand)
Proteasome subunit beta type-2 (28 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn9 (45 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit alpha type-3 (28 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn10 (29 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn13 (17 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-3 (22 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn6 (49 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Adenosine-5'-diphosphate (427 Da, Ligand)
26s proteasome of saccharomyces cerevisiae in presence of amp-pnp (1 MDa, Complex from Saccharomyces cerevisiae S288c)
26s proteasome regulatory subunit rpn2 (104 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome complex subunit sem1 (10 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit alpha type-5 (28 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-5 (31 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-6 (26 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit alpha type-2 (27 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn1 (109 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn3 (60 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Ubiquitin carboxyl-terminal hydrolase rpn11 (34 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Magnesium ion (24 Da, Ligand)
26s proteasome regulatory subunit rpn5 (51 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))

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EMD-3537

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26S proteasome in presence of BeFx (s4)

Release date: March 8, 2017
Resolution: 7.7 Å
EM Method: Single-particle
Fitted PDBs: 5mpc
Q-score: 0.135

Wehmer M, Rudack T, Beck F, Aufderheide A, Pfeifer G, Plitzko JM, Forster F, Schulten K, Baumeister W, Sakata E

PNAS (2017) 114 pp. 1305-1310 [ Pubmed: 28115689 DOI: doi:10.1073/pnas.1621129114 ]

Sample:

26s protease regulatory subunit 7 homolog (52 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Ubiquitin carboxyl-terminal hydrolase 6 (57 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn8 (38 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit alpha type-6 (25 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-4 (22 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s protease subunit rpt4 (49 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s protease regulatory subunit 4 homolog (48 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s protease regulatory subunit 6a (48 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s protease regulatory subunit 8 homolog (45 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn12 (31 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-1 (23 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-7 (29 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit alpha type-1 (28 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit alpha type-4 (28 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s protease regulatory subunit 6b homolog (47 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Probable proteasome subunit alpha type-7 (31 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn7 (49 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-2 (28 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn9 (45 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit alpha type-3 (28 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn10 (29 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn13 (17 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome of saccharomyces cerevisiae in presence of befx (s4) (1 MDa, Complex from Saccharomyces cerevisiae S288c)
Proteasome subunit beta type-3 (22 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn6 (49 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Adenosine-5'-diphosphate (427 Da, Ligand)
26s proteasome regulatory subunit rpn2 (104 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome complex subunit sem1 (10 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit alpha type-5 (28 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-5 (31 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Proteasome subunit beta type-6 (26 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Adenosine-5'-triphosphate (507 Da, Ligand)
Proteasome subunit alpha type-2 (27 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn1 (109 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
26s proteasome regulatory subunit rpn3 (60 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Ubiquitin carboxyl-terminal hydrolase rpn11 (34 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Magnesium ion (24 Da, Ligand)
26s proteasome regulatory subunit rpn5 (51 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))

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